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Humandiseaseontology ⭐ 315

Repository for the Human Disease Ontology.

Human Phenotype Ontology ⭐ 269

Ontology for the description of human clinical features

Cell Ontology ⭐ 126

An ontology of cell types

A community-driven ontology for the representation of environments

So Ontologies ⭐ 83

Collect of SO Ontologies

OBO Organized Knowledge: Training materials for becoming an OBO engineer

The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

PATO - the Phenotype And Trait Ontology

Ontology for consent codes and data use requirements

Sepio Ontology ⭐ 44

Ontology for representing scientific evidence and provenance information

Ubergraph ⭐ 34

Integrated OBO ontology store

An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)

Environmental Exposure Ontology ⭐ 30

Modular environmental exposures ontology

Behavior Ontology ⭐ 23

Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes

Thesaurus Obo Edition ⭐ 22

OBO Library edition of NCIt

Mammalian Phenotype Ontology ⭐ 19

Standard terms for annotating mammalian phenotypic data

Unit Ontology ⭐ 17

An ontology of units of measurements

The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of an antibiotic

Biological Collections Ontology

Vaccine Ontology

Fission Yeast Phenotype Ontology

The Ontology for Modeling and Representation of Social Entities

An ontology of core ecological entities

Contributor Role Ontology ⭐ 13

This ontology provides contribution roles for use in crediting persons or organizations.

An ontology about groups of interacting organisms such as populations and communities

Biobanking ⭐ 12

Ontology for Biobanking

Plant Stress Ontology ⭐ 12

An ontology containing biotic and abiotic plant stresses. Part of the Planteome suite of reference ontologies. Formerly called the Ontology of Plant Stress

Compositional Dietary Nutrition Ontology

Biological Spatial Ontology ⭐ 11

An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces

C Elegans Phenotype Ontology ⭐ 10

Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase

This repository contains the ontology for the Anatomy of the Insect SkeletoMuscular system (AISM), which contains terms used to describe the cuticle - as a single anatomical structure - and the skeletal muscle system, to be used in insect biodiversity research.

Developmental Stage Ontologies ⭐ 9

Source files for various species-specific stage ontologies

Xenopus Phenotype Ontology ⭐ 9

XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and X. tropicalis.

C Elegans Gross Anatomy Ontology ⭐ 8

C. elegans Gross Anatomy Ontology

Apollo Sv ⭐ 8

Repository for Apollo-SV ontology. Versioning Apollo-SV independently of the software was made easiest by having it as a separate repository.

Provisional_cell_ontology ⭐ 7

Draft cell type definitions from data - candidates for inclusion in CL

Fungal Anatomy Ontology ⭐ 7

A structured controlled vocabulary for the anatomy of fungi

Veupathdb Ontology ⭐ 7

The VEuPathDB ontology is an application ontology developed to encode our understanding of what data is about in the public resources developed and maintained by the Eukaryotic Pathogen, Host & Vector Genomics Resource (VEuPathDB; https://veupathdb.org).

Hancestro ⭐ 6

Dicty Phenotype Ontology ⭐ 6

Dicty Phenotype Ontology

Planaria Ontology ⭐ 5

PLANA, the PLANarian Anatomy Ontology, encompasses the anatomy of developmental stages and adult biotypes of Schmidtea mediterranea.

Pathogen-Host Interaction Phenotype Ontology

The Coleoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of beetles in biodiversity research.

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