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Search results for neuroscience connectomics

11 search results found

Euclidean Distance Transform 3d ⭐ 201

Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

Distributed, Versioned, Image-oriented Dataservice

Catmaid ⭐ 167

Collaborative Annotation Toolkit for Massive Amounts of Image Data

Pytorch_connectomics ⭐ 151

PyTorch Connectomics: segmentation toolbox for EM connectomics

Braingraph ⭐ 94

Graph theory analysis of brain MRI data

KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural morphology and connectivity.

Micaopen ⭐ 58

Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute

BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.

Workstation ⭐ 19

Janelia Workstation

Awesome Vem Datasets ⭐ 8

Open source volume electron microscopy (vEM) datasets for connectomics.

Support functions for analysis of FAFB EM segmentation

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