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Search results for neuroimaging fmri
fmri
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neuroimaging
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54 search results found
Nilearn
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1,076
Machine learning for NeuroImaging in Python
Fmriprep
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599
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Pycortex
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534
Pycortex is a python-based toolkit for surface visualization of fMRI data
Brainiak
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315
Brain Imaging Analysis Kit
Tedana
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149
TE-dependent analysis of multi-echo fMRI
Canlabcore
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135
Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.
Braingraph
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94
Graph theory analysis of brain MRI data
Dyconnmap
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89
A dynamic connectome mapping module in python.
Mmvt
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80
The Multi-Modality Visualization Tool (MMVT) is built for researchers who wish to have a better understanding of their neuroimaging anatomical and spatio-temporal data
Automaticanalysis
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70
Automatic Analysis (aa)
Visualqc
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68
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
Halfpipe
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56
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
Stagin
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55
STAGIN: Spatio-Temporal Attention Graph Isomorphism Network
Spm
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50
SPM (Statistical Parametric Mapping) - Development Version
Network_tda_tutorial
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43
This repository is dedicated for the tutorial on network and topological neuroscience.
Advanced_fmri_course
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43
List of ressources and practicals used for the fMRI data analysis course of UoB (UK) (2014-2017)
Fmriflows
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42
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
Samri
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39
Small Animal Magnetic Resonance Imaging via Python.
Ni Edu
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36
Student version of NI-edu courses
Ecobidas
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35
Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist
Actflowtoolbox
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29
The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network simulations and machine learning prediction. Helps determine how connections contribute to specific brain functions.
Brainplotlib
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25
A lightweight package to plot brain surfaces with Python.
Niak
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24
GNU Octave library for connectivity analysis in large fMRI datasets
Canlab_help_examples
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24
How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.
Online_neuroimaging_resources
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24
a laundry list of resources for MRI, fMRI, EEG, MEG...
Neuroml2020
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20
Machine Learning in Neuroimaging data, Fall 2020.
Nibabies
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19
Processing tools for magnetic resonance images of infant brains
Spm Docs
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15
SPM Documentation
Xdf
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14
xDF estimates variance of Pearson's correlations among highly autocorrelated time series.
Rmvpa
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12
Multivoxel Pattern Analysis in R
Junifer
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12
Forschungszentrum Jülich Neuroimaging Feature Extractor
Bids Tools
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11
Tools for dealing with neuroimaging data in the BIDS structure
Conn_tools
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11
Some tools for the extraction and plot of second-level ROI-to-ROI results from CONN Toolbox
Brainconn
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10
A Python implementation of the brain connectivity toolbox.
Kul_nis
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10
KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.
Budapest Fmri Data
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10
Quality assurance analyses of fMRI data collected while participants watched The Grand Budapest Hotel by Wes Anderson.
Friendengine
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10
FRIEND engine is a new implementation of the FRIEND software, a fMRI neurofeedback processing package, already available on the NITRC repository
Fmri_roi_analysis_tool
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10
An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usage includes the creation of regional maps of temporal signal to noise ratio.
Pypes
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9
Reusable neuroimaging pipelines using nipype
Sdc Bids Fmri
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9
fMRI Imaging Analysis
Dvars
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8
Insight & Inference for DVARS: 3-part variance decomposition, gives units & p-values to DVARS measures as well as spatiotemporal rs-fMRI diagnostic.
Hed Specification
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8
Specification documents for HED (Hierarchical Event Descriptors)
Aroma
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7
ICA-AROMA, as a Python package. A work in progress.
Hed Python
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7
Python validation, summary, and analysis tools for HED (Hierarchical Event Descriptors).
Neurosynth_semantic_map
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6
A repository for "The Latent Semantic Space and Corresponding Brain Regions of the Functional Neuroimaging Literature" -- http://www.biorxiv.org/content/early/2017/07/20/15
Bayesfactorfmri
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6
BayesFactorFMRI is a tool developed with R and Python to allow neuroimaging researchers to conduct Bayesian second-level analysis of fMRI data and Bayesian meta-analysis of fMRI images with multiprocessing.
Lectures_on_neuroimaging
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6
Oppni
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6
Optimization of Preprocessing Pipelines for NeuroImaging (OPPNI) for fMRI preprocessing
Afniglmprep
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5
afniGLMprep is python code which prepares and runs GLMs on neuroimaging data stored in the BIDS format (http://bids.neuroimaging.io/). This is done via AFNI's 3dDeconvolve function.
Niseq
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5
group sequential tests for neuroimaging
Deepretinotopy
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5
Code for predicting retinotopy from anatomy using geometric deep learning. See paper for more --> https://www.sciencedirect.com/science/article/pii/
Nonfractal
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5
MATLAB Toolbox for estimating nonfractal connectivity and fractal connectivity
Kylespmtoolbox
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5
Repository home of custom MATLAB scripts designed to perform mass univariate analyses using the Statistical Parametric Mapping (SPM) software package
Conan
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5
CONnectivity ANalysis tools in Matlab
1-54 of 54 search results
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