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🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

Genetonic ⭐ 74

Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail

Pancancer ⭐ 61

Building classifiers using cancer transcriptomes across 33 different cancer-types

Evolutionary Transcriptomics with R

orthomap is a python package to extract orthologous maps (in other words the evolutionary age of a given orthologous group) from OrthoFinder/eggNOG results. Orthomap results (gene ages per orthogroup) can be further used to calculate weigthed expression data (transcriptome evolutionary index) from scRNA sequencing objects.

RefEx: a reference gene expression dataset of mammalian tissues and cell lines measured by different methods

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