Yoc
YOC is a whole genome alignment tool designed for collinear genomes.
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Jcvi | 650 |  | 1 | 1 | 5 months ago | 97 | August 30, 2023 | 41 | bsd-2-clause | Python |
| Python library to facilitate genome assembly, annotation, and comparative genomics | ||||||||||
| Dna2json | 357 |  | 7 | 4 | 7 years ago | 14 | July 13, 2017 | 3 | mit | JavaScript |
| Formats your genome file as JSON | ||||||||||
| Hal | 134 | 7 months ago | 97 | other | C++ | |||||
| Hierarchical Alignment Format | ||||||||||
| Cuttlefish | 64 | a year ago | 8 | bsd-3-clause | C++ | |||||
| Building the compacted de Bruijn graph efficiently from references or reads. | ||||||||||
| Snap | 41 | 2 years ago | 12 | other | C | |||||
| Gene prediction software | ||||||||||
| Gwasvcf | 36 | 9 months ago | 16 | other | HTML | |||||
| Reading, querying and writing GWAS summary data in VCF format | ||||||||||
| Pmsignature | 32 | 5 years ago | 15 | R | ||||||
| R package for extracting mutation signatures from a list of somatic mutations | ||||||||||
| Vgp Tools | 26 | a year ago | 3 | other | C | |||||
| Pore C Snakemake | 25 | a year ago | 29 | other | Python | |||||
| Gerbil | 23 | 4 years ago | 9 | mit | C++ | |||||
| A fast and memory-efficient k-mer counter with GPU-support | ||||||||||
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