Project Name	Stars	Repos Using This	Packages Using This	Most Recent Commit	Total Releases	Latest Release	Open Issues	License	Language
Cromwell	944			3 months ago	37	May 18, 2022	762	bsd-3-clause	Scala
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Arvados	354			3 months ago	9	September 21, 2023	13	other	Go
An open source platform for managing and analyzing biomedical big data
Cwltool	314	158	38	3 months ago	430	December 07, 2023	458	apache-2.0	Python
Common Workflow Language reference implementation
Dockstore	113			3 months ago			518	apache-2.0	Java
Our VM/Docker sharing infrastructure and management component
Analysis Workflows	99			10 months ago			89	mit	Common Workflow Language
Open workflow definitions for genomic analysis from MGI at WUSM.
Bunny	70			5 years ago			72	apache-2.0	Common Workflow Language
[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
Tibanna	68		1	3 months ago	280	October 06, 2023	25	mit	Python
Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
Cwlviewer	40			3 months ago			62	apache-2.0	Java
A web application to view and share Common Workflow Language workflows
Workflows	28			3 months ago			9	mit	WDL
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
Hotsub	23			5 years ago	22	November 14, 2018	11	gpl-3.0	Go
Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources

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Cromwell ⭐ 944

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

total releases 37most recent commit 3 months ago

Arvados ⭐ 354

An open source platform for managing and analyzing biomedical big data

total releases 9most recent commit 3 months ago

Cwltool ⭐ 314

Common Workflow Language reference implementation

dependent packages 38total releases 430most recent commit 3 months ago

Dockstore ⭐ 113

Our VM/Docker sharing infrastructure and management component

most recent commit 3 months ago

Analysis Workflows ⭐ 99

Open workflow definitions for genomic analysis from MGI at WUSM.

most recent commit 10 months ago

Bunny ⭐ 70

[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

most recent commit 5 years ago

Tibanna ⭐ 68

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

dependent packages 1total releases 280most recent commit 3 months ago

Cwlviewer ⭐ 40

A web application to view and share Common Workflow Language workflows

most recent commit 3 months ago

Workflows ⭐ 28

Bioinformatics workflows developed for and used on the St. Jude Cloud project.

most recent commit 3 months ago

Hotsub ⭐ 23

Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources

total releases 22most recent commit 5 years ago

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