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Python package with helper tools for the nf-core community.
Stars
205
License
mit
Open Issues
221
Most Recent Commit
a year ago
Programming Language
Python
Monthly Downloads
pypi nf-core Downloads
Dependent Packages
2
Total Releases
42
Latest Release
December 20, 2023
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Alternatives To Tools
Project NameStarsDownloadsRepos Using ThisPackages Using ThisMost Recent CommitTotal ReleasesLatest ReleaseOpen IssuesLicenseLanguage
Nextflow2,44716a year ago250November 24, 2023336apache-2.0Groovy
A DSL for data-driven computational pipelines
Galaxy1,211pypi galaxy-util} Downloads223a year ago30December 08, 20232,169otherPython
Data intensive science for everyone.
Scipipe1,010
2 years ago47October 14, 202151mitGo
Robust, flexible and resource-efficient pipelines using Go and the commandline
Rush782
a year ago32November 13, 20237mitGo
A cross-platform command-line tool for executing jobs in parallel
Juicer313
2 years ago40mitShell
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Sarek299
a year ago180mitNextflow
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Bedops244
3 years ago1March 03, 202117otherC
:microscope: BEDOPS: high-performance genomic feature operations
Bpipe220
2 years ago155otherGroovy
Bpipe - a tool for running and managing bioinformatics pipelines
Tools205pypi nf-core} Downloads2a year ago42December 20, 2023221mitPython
Python package with helper tools for the nf-core community.
Ugene190
a year ago6gpl-2.0C++
UGENE is free open-source cross-platform bioinformatics software
Alternatives To Tools
Select To Compare
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250most recent commit a year ago
Galaxy ⭐ 1,211
Data intensive science for everyone.
dependent packages 23total releases 30most recent commit a year agopypi galaxy-util} Downloads
Tools ⭐ 205
Python package with helper tools for the nf-core community.
dependent packages 2total releases 42most recent commit a year agopypi nf-core} Downloads


Suggest An Alternative To tools
Alternative Project Comparisons
Tools vs Nextflow
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