Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
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Hickit | 69 | 3 years ago | 10 | C | ||||||
TAD calling, phase imputation, 3D modeling and more for diploid single-cell Hi-C (Dip-C) and general Hi-C | ||||||||||
Contact_map | 31 | 9 months ago | 12 | October 28, 2020 | 9 | lgpl-2.1 | Python | |||
Contact map analysis for biomolecules; based on MDTraj | ||||||||||
Voronota | 20 | 3 months ago | mit | C++ | ||||||
Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic balls. | ||||||||||
Genomedisco | 18 | 6 years ago | 1 | Jupyter Notebook | ||||||
Software for comparing contact maps from HiC, CaptureC and other 3D genome data. | ||||||||||
Respre | 13 | 5 years ago | Python | |||||||
ResPRE is an algorithm for protein residue-residue contact-map prediction | ||||||||||
Gcmapexplorer | 13 | 2 years ago | 28 | January 28, 2019 | 1 | gpl-3.0 | Python | |||
Genome Contact Map Explorer - gcMapExplorer. Visit: |