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Zika Seq

Pipelines to do MinION sequencing of Zika virus
Stars
12
License
No license specified
Open Issues
6
Most Recent Commit
5 years ago
Programming Language
Python
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Alternatives To Zika Seq
Project NameStarsDownloadsRepos Using ThisPackages Using ThisMost Recent CommitTotal ReleasesLatest ReleaseOpen IssuesLicenseLanguage
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An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.
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de novo virus assembler of Illumina paired reads
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Generate unique KMERs for every contig in a FASTA file
Varvamp15
3 months ago15November 20, 2023gpl-3.0Python
Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
Zika Seq12
5 years ago6Python
Pipelines to do MinION sequencing of Zika virus
Diversitools10
a year ago6gpl-3.0Perl
Tool for analysing viral diversity from High Throughput Sequencing
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de novo virus assembler of Illumina paired reads
total releases 16most recent commit 3 years ago


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Zika Seq vs Serratus
Zika Seq vs Nextclade
Zika Seq vs V Pipe
Zika Seq vs Fastv
Zika Seq vs Virtool
Zika Seq vs Iva
Zika Seq vs Uniquekmer
Zika Seq vs Varvamp
Zika Seq vs Diversitools
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