Project Name	Stars	Most Recent Commit	Total Releases	Latest Release	Open Issues	License	Language
Dsuite	123	7 months ago			36		C++
Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species
Vcfstats	48	8 months ago	15	September 27, 2023	2	mit	Python
Powerful statistics for VCF files
Proxysnps	21	6 years ago			10	mit	R
:bookmark: Get SNP proxies from the 1000 Genomes Project.
Genetics Sumstat Harmoniser	9	3 years ago			1	apache-2.0	Python
Harmonise GWAS summary statistics against a reference VCF
Pygwasvcf	5	2 years ago	1	March 18, 2022	4	mit	Python
Python library for reading GWAS summary statistics in GWAS-VCF files

Alternatives To Pygwasvcf

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Dsuite ⭐ 123

Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species

most recent commit 7 months ago

Vcfstats ⭐ 48

Powerful statistics for VCF files

total releases 15most recent commit 8 months ago

Proxysnps ⭐ 21

:bookmark: Get SNP proxies from the 1000 Genomes Project.

most recent commit 6 years ago

Genetics Sumstat Harmoniser ⭐ 9

Harmonise GWAS summary statistics against a reference VCF

most recent commit 3 years ago

Pygwasvcf ⭐ 5

Python library for reading GWAS summary statistics in GWAS-VCF files

total releases 1most recent commit 2 years ago

Suggest An Alternative To pygwasvcf

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Pygwasvcf vs Dsuite

Pygwasvcf vs Vcfstats

Pygwasvcf vs Proxysnps

Pygwasvcf vs Genetics Sumstat Harmoniser

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