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Search results for vcf fastq

24 search results found

Rust Bio Tools ⭐ 154

A set of command line utilities based on Rust-Bio.

Genomics ⭐ 154

A collection of scripts and notes related to genomics and bioinformatics

Genozip ⭐ 144

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

Mutscan ⭐ 127

Detect and visualize target mutations by scanning FastQ files directly

Ngscheckmate ⭐ 106

Software program for checking sample matching for NGS data

A DNA Sequence Alignment/Map (SAM) library for Clojure

Pipeline Structural Variation ⭐ 87

Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

Neat Genreads ⭐ 72

NEAT read simulation tools

Opengene.jl ⭐ 61

(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

MutMap pipeline to identify causative mutations responsible for a phenotype

QTL-seq pipeline to identify causative mutations responsible for a phenotype

Frequently used commands in bioinformatics

QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.

Germline Dna ⭐ 23

A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample

Allbiotc2 ⭐ 22

Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.

ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications

Rnaseq Nf ⭐ 20

RNAseq analysis pipeline

Alignment Nf ⭐ 18

Whole Exome/Whole Genome Sequencing alignment pipeline

Color DNA/RNA bases in terminal output

Seq Collection ⭐ 9

Pythonngstools ⭐ 9

Scripts for NGS processing

Biocpp Io ⭐ 8

BioC++ Input/Output library

Sentieon Dnascope Ml ⭐ 7

Sentieon DNAscope + Machine Learning Model

Rgapeppipe ⭐ 5

Reference Guided Assembly Pepperell Lab Pipeline

Related Searches

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Pipeline Fastq (218)

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Genome Fastq (185)

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C Plus Plus Vcf (126)

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