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Search results for variants cancer genomics
cancer-genomics
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variants
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6 search results found
Maftools
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400
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
Awesome Cancer Variant Databases
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284
A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
Pcgr
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234
Personal Cancer Genome Reporter (PCGR)
Lancet
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145
Microassembly based somatic variant caller for NGS data
Teamteri
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50
Genomics (computational bioinformatic data analysis) running on GCP, AWS or Azure
Cpsr
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50
Cancer Predisposition Sequencing Reporter (CPSR)
Civic Client
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49
Web client for CIViC: Clinical Interpretations of Variants in Cancer
Civic Server
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39
Backend Server for CIViC Project
Cacao
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22
Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer
Civic V2
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18
CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer
Variants2neoantigen
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14
a neoantigen calling pipeline begins from variants record file (MAF)
Umccrise
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14
🐍 DRAGEN Tumor/Normal workflow post-processing
Svparser
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6
Explore and filter structural variant calls from Lumpy and Delly VCF files
Virtual Normal Correction
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6
Set of commandline tools for analysis of tumor variants without a matching normal. Method described in Genome Research: http://genome.cshlp.org/content/25/9/1382.full
Fings
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6
Filters for Next Generation Sequencing
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