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Search results for segmentation registration

49 search results found

3d Pointcloud ⭐ 1,940

Papers and Datasets about Point Cloud.

Awesome Gan For Medical Imaging ⭐ 1,919

Awesome GAN for Medical Imaging

Slicer ⭐ 1,339

Multi-platform, free open source software for visualization and image computing.

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

Cilantro ⭐ 892

A lean C++ library for working with point cloud data

Slicergitsvnarchive ⭐ 883

Multi-platform, free open source software for visualization and image computing.

Simpleitk ⭐ 801

SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

Easyreg ⭐ 130

an image registration/augmentation/segmentation package

Advanced Normalization Tools in R

Brainstools ⭐ 95

A suite of tools for medical image processing focused on brain analysis

Processing Library and Analysis Toolkit for Medical Imaging in Python

Awesome Implicit Neural Representations In Medical Imaging ⭐ 69

[ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging

Mitk Diffusion ⭐ 56

MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit

Extensionsindex ⭐ 52

Slicer extensions index

Brainprep ⭐ 51

Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.

Napari Hub ⭐ 46

Discover, install, and share napari plugins

Unsupervised Medical Image Segmentation ⭐ 42

Code for "Contrastive Registration for Unsupervised Medical Image Segmentation".

Deepfluorolabeling Ipcai2020 ⭐ 39

Code and data for the "annotation" component of the IPCAI 2020 paper: "Automatic Annotation of Hip Anatomy in Fluoroscopy for Robust and Efficient 2D/3D Registration." https://arxiv.org/abs/1911.07042 or https://doi.org/10.1007/s11548-020-02162-7

Slicercustomapptemplate ⭐ 38

Template to be used as a starting point for creating a custom 3D Slicer application

Itksoftwareguide ⭐ 31

Sources for the ITKSoftwareGuide.

A unified library for 3D data processing with both c++ and python API

Deepatlas ⭐ 27

Joint Semi-supervised Learning of Image Registration and Segmentation

Cardiac Image Multi-Atlas Segmentation pipeline (CIMAS)

Acrn_chest_x Ray_ia ⭐ 19

Learning Deformable Registration of Medical Images with Anatomical Constraints

Registration ⭐ 17

Generate Point Cloud by Realsense and Register by PCL library

Itk V3d Plugins ⭐ 16

Plugins for the V3D application, that provide ITK image segmentation and registration functionalities. Please note that the official repository for this code has now moved to https://svn.janelia.org/penglab/projects/v3d

Oai_analysis_2 ⭐ 15

Image analysis approaches to analyze the OAI magnetic resonance images

Tridfusion ⭐ 13

TriDFusion (3DF) Medical Imaging Viewer

Abdominal_registration ⭐ 13

Deep learning based registration for Learn2Reg Challenge (Task 3 : CT Abdominal)

Slicercochlea ⭐ 11

Multi-modal cochlea Images registration, segmentation and analysis

Ct_regsegm ⭐ 10

Segmentation of lungs in 3D Computed Tomography (CT) scans via non-rigid image registration

RegSeg is a simultaneous segmentation and registration method that uses active contours without edges (ACWE) extracted from structural images. The contours evolve through a free-form deformation field supported by the B-spline basis to optimally map the contours onto the data in the target space.

4dsegment ⭐ 10

Itk4_topics ⭐ 10

Working copy of ITK4 repository for working on topic branches

Eth Segreg ⭐ 10

Algorithms and methods for (medical) image registration and segmentation

Timagetk ⭐ 10

3D and 2D Image processing algorithms in Python for tissues

Coupling_registration_segmentation ⭐ 9

This repository is the official repository of the article U-ReSNet: Ultimate coupling of Registration and Segmentation with deep Nets presented in Miccai 2019 (Shenzhen)

Semi-manual alignment to reference templates (SMART): An open source pipeline in R for whole brain mapping

Slicer Abltemporalbonesegmentation ⭐ 8

3D Slicer extension featuring spacing resampling, fiducial registration, and rigid registration of temporal bone images.

Zfvascularquantification ⭐ 8

#ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720

4dsegment ⭐ 7

Deep learning cardiac segmentation and motion tracking

Advanced Medical Image Processing ⭐ 7

A package for all projects of Medical Image processing at Vanderbilt (papers are in google drive)

Simpleseg ⭐ 7

Simple Atas-Based Segmentation

E2dhipseg ⭐ 7

This contains official implementation for Extended 2D Volumetric Consensus Hippocampus Segmentation

Fork of ITK for video processing based on ITK from ITK.org.

Segmentation and Analysis of Lung CT scans

Mutlimodal Imge Registration ⭐ 5

Multimodal image image registration main functions such as mutual information (MI), histogram segmentation, rigid transformation, and RMSE

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