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Search results for rna seq nanopore

14 search results found

Reference-guided transcript discovery and quantification for long read RNA-Seq data

Identification of differential RNA modifications from nanopore direct RNA sequencing

Isoquant ⭐ 98

Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)

Pipeline Transcriptome De ⭐ 95

Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads

Sg Nex Data ⭐ 80

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project

Pychopper ⭐ 74

A tool to identify, orient, trim and rescue full length cDNA reads

Long Reads Annotation pipeline

Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

Poreplex ⭐ 51

A versatile sequenced read processor for nanopore direct RNA sequencing

Tools to annotate genomes using long read transcriptomics data

Pipeline Pinfish Analysis ⭐ 22

Pipeline for annotating genomes using long read transcriptomics data with pinfish

Master of Pores 2

Trackcluster ⭐ 9

An analysis pipeline for Nanopore direct-RNA sequencing

Clair3 Rna ⭐ 5

Clair3-RNA - long-read short variant caller for RNA sequencing data

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