Awesome Open Source

Programming Languages

Search results for protein biology

30 search results found

Awesome Deepbio ⭐ 1,467

A curated list of awesome deep learning applications in the field of computational biology

Biotite ⭐ 515

A comprehensive library for computational molecular biology

Official code repository of "BERTology Meets Biology: Interpreting Attention in Protein Language Models."

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

a JavaScript DNA, RNA, and protein sequence viewer

Dspp Keras ⭐ 160

Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.

Compbiodatasetsformachinelearning ⭐ 120

A Curated List of Computational Biology Datasets Suitable for Machine Learning

Buddysuite ⭐ 105

Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files

Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)

Lasagne4bio ⭐ 88

Biostructures.jl ⭐ 77

A Julia package to read, write and manipulate macromolecular structures (particularly proteins)

Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023

Mitos.jl ⭐ 64

Mutual Information Tools for protein Sequence analysis in Julia

Awesome Structural Bioinformatics ⭐ 54

Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

Cath Tools ⭐ 51

Protein structure comparison tools such as SSAP and SNAP

Bioblender21 ⭐ 47

Blender plugin to process biological data and molecular work.

A framework for rapidly mining structural information from the Protein Data Bank

Data visualization library for creating interactive graphs and dashboards for bioinformatics etc.

Biorender ⭐ 22

An Interactive Cell for the Web(GL)

Hackingstructbioltalk ⭐ 16

Hacking structural biology with Python and pandas

Topefind Public ⭐ 14

Finding the pitfalls of deep learning predictors of interacting residues in antibodies 🦠

lib310 python package

Awesome Whole Cell Simulation ⭐ 12

MOVING TO: https://github.com/cirosantilli/cirosantilli.githu SEE README. Because sometimes you just want to simulate single prokaryotic biological living whole cell models starting from DNA to minute detail to understand how it works and predict simple experimental observations.

PHOsphoproteomic dissecTiOn using Networks

Coursera Bioinformatics ⭐ 9

My solution to Bioinformatics Specialization (Finding Hidden Messages in DNA; Genome Sequencing; Comparing Genes, Proteins, and Genomes; Molecular Evolution; Genomic Data Science and Clustering; Finding Mutations in DNA and Proteins; Bioinformatics Capstone: Big Data in Biology)

Scienzalist ⭐ 9

Awesome list di risorse e link di scienza

Public_notebooks ⭐ 8

Repository of Jupyter Notebooks created by the Bio2Byte group

Aa_subtypes ⭐ 7

Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape

Call TMHMM from R, to predict transmembrane helices in proteins

Learning hierarchical motif representations for proteins.

Mybiotools ⭐ 5

Python scripts for biologists

Schema Raspp ⭐ 5

RASPP algorithm for structure-guided protein recombination

A command-line tool that analyses the diversity and motifs of protein/nucleotide sequences.

Related Searches

Python Protein (1,344)

Jupyter Notebook Protein (296)

Protein Pdb (285)

Bioinformatics Protein (282)

Python Biology (278)

R Protein (245)

Interaction Protein (204)

Bioinformatics Biology (196)

1-30 of 30 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.