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1,518 search results found

Hic Pro ⭐ 346

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

Melusine ⭐ 335

Melusine is a high-level library for emails classification and feature extraction "dédiée aux courriels français".

Pipelines ⭐ 334

Pipelines is a language for high-level data analysis.

Katana Skipper ⭐ 332

Simple and flexible ML workflow engine

Fileconveyor ⭐ 329

File Conveyor is a daemon written in Python to detect, process and sync files. In particular, it's designed to sync files to CDNs. Amazon S3 and Rackspace Cloud Files, as well as any Origin Pull or (S)FTP Push CDN, are supported. Originally written for my bachelor thesis at Hasselt University in Belgium.

Pipe2py ⭐ 322

A project to compile Yahoo! Pipes into Python (see it hosted on Google App Engine: http://pipes-engine.appspot.com)

Pyscenic ⭐ 321

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

Gtex Pipeline ⭐ 317

GTEx & TOPMed data production and analysis pipelines

Neural Pipeline ⭐ 314

Neural networks training pipeline based on PyTorch

Large Scale Facial Model (LSFM) - an automatic pipeline for constructing 3D Morphable Models from large collections of facial meshes

Hypergbm ⭐ 306

A full pipeline AutoML tool for tabular data

Amazon Textract Serverless Large Scale Document Processing ⭐ 302

Process documents at scale using Amazon Textract

Data Engineering With Python ⭐ 302

Data Engineering with Python, published by Packt

Sparkflow ⭐ 301

Easy to use library to bring Tensorflow on Apache Spark

Python web scraping framework

Sparktorch ⭐ 297

Train and run Pytorch models on Apache Spark.

Fluid dynamics component of Chemical Engineering Design Library (ChEDL)

Gokart solves reproducibility, task dependencies, constraints of good code, and ease of use for Machine Learning Pipeline.

Fondant ⭐ 293

Production-ready data processing made easy and shareable

Atac Seq Pipeline ⭐ 290

ENCODE ATAC-seq pipeline

Textpipe ⭐ 290

Textpipe: clean and extract metadata from text

Cloudless ⭐ 290

Deep learning pipeline for orbital satellite data for detecting clouds

Markdown To Confluence ⭐ 288

Syncs Markdown files to Confluence

Foremast ⭐ 277

Spinnaker Pipeline/Infrastructure Configuration and Templating Tool - Pipelines as Code.

TorchX is a universal job launcher for PyTorch applications. TorchX is designed to have fast iteration time for training/research and support for E2E production ML pipelines when you're ready.

Butterfree ⭐ 269

A tool for building feature stores.

Low-code Python library to safely use notebooks in production: schedule workflows, generate assets, trigger webhooks, send notifications, build pipelines, manage secrets (Cloud-only)

Nimbusml ⭐ 265

Python machine learning package providing simple interoperability between ML.NET and scikit-learn components.

Gstreamer Cheat Sheet ⭐ 265

Gstreamer command-line cheat sheet

一个灵活、友好的爬虫框架

Funannotate ⭐ 261

Eukaryotic Genome Annotation Pipeline

Simple Camera Pipeline ⭐ 259

A simple and light-weight camera image processing pipeline

Pypette ⭐ 259

Ridiculously simple flow controller for building complex pipelines

Negspacy ⭐ 257

spaCy pipeline object for negating concepts in text

Feature Selection For Machine Learning ⭐ 248

Code repository for the online course Feature Selection for Machine Learning

Android Automation ⭐ 247

利用Jenkins实现Android自动打包发包

DBND is an agile pipeline framework that helps data engineering teams track and orchestrate their data processes.

SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers

The easiest way to use Machine Learning. Mix and match underlying ML libraries and data set sources. Generate new datasets or modify existing ones with ease.

Morphl Community Edition ⭐ 233

MorphL Community Edition uses big data and machine learning to predict user behaviors in digital products and services with the end goal of increasing KPIs (click-through rates, conversion rates, etc.) through personalization

Starfish ⭐ 220

starfish: unified pipelines for image-based transcriptomics

Pipeline components for real-time phylodynamic analysis

PEPPER-Margin-DeepVariant

Behavioral Cloning ⭐ 215

Third Project of the Udacity Self-Driving Car Nanodegree Program

Forte is a flexible and powerful ML workflow builder. This is part of the CASL project: http://casl-project.ai/

Pipelinex ⭐ 212

PipelineX: Python package to build ML pipelines for experimentation with Kedro, MLflow, and more

Pytorchpipe ⭐ 211

PyTorchPipe (PTP) is a component-oriented framework for rapid prototyping and training of computational pipelines combining vision and language

Sphinx Themes.org ⭐ 209

A showcase for Sphinx documentation themes

Kapture Localization ⭐ 206

Provide mapping and localization pipelines based on kapture format

Python package with helper tools for the nf-core community.

An ML framework to accelerate research and its path to production.

Googleml ⭐ 203

Google机器学习教程笔记（基础版）

Batchflow ⭐ 195

BatchFlow helps you conveniently work with random or sequential batches of your data and define data processing and machine learning workflows even for datasets that do not fit into memory.

Toloka Kit ⭐ 195

Toloka-Kit is a Python library for working with Toloka API.

Dendropy ⭐ 195

A Python library for phylogenetic scripting, simulation, data processing and manipulation.

Pytorch_tempest ⭐ 193

My repo for training neural nets using pytorch-lightning and hydra

Spacy Lookup ⭐ 190

Named Entity Recognition based on dictionaries

Data Testing With Airflow ⭐ 190

Buildflow ⭐ 188

BuildFlow, is an open source framework for building large scale systems using Python. All you need to do is describe where your input is coming from and where your output should be written, and BuildFlow handles the rest. No configuration outside of the code is required.

Scrapyz ⭐ 188

"Scrape Easy" - an extension of the Scrapy framework.

Chip Seq Pipeline2 ⭐ 188

ENCODE ChIP-seq pipeline

Pipeline Live ⭐ 187

Pipeline Extension for Live Trading

Somaticseq ⭐ 185

An ensemble approach to accurately detect somatic mutations using SomaticSeq

Developer platform for production ML.

Wheelwright ⭐ 171

🎡 Automated build repo for Python wheels and source packages

Dataflow ⭐ 169

Efficient Data Loading Pipeline in Pure Python

Chembl_structure_pipeline ⭐ 167

ChEMBL database structure pipelines

Airflow_for_beginners ⭐ 166

The safe post-production pipeline - https://getavalon.github.io/2.0

Cicd Templates ⭐ 166

Manage your Databricks deployments and CI with code.

A Python command-line shell

Osbuild ⭐ 161

Build-Pipelines for Operating System Artifacts

CGAT-ruffus is a lightweight python module for running computational pipelines

Udacity Self-Driving Car Project 5: Vehicle Detection and Tracking

Consecution ⭐ 159

🚎 A pipeline abstraction for Python

Datajoint Python ⭐ 158

Relational data pipelines for the science lab

Dataflowpythonsdk ⭐ 157

Google Cloud Dataflow provides a simple, powerful model for building both batch and streaming parallel data processing pipelines.

Machine Learning eXchange (MLX). Data and AI Assets Catalog and Execution Engine

Motorway ⭐ 154

Cloud ready pure-python streaming data pipeline library

Pythoncrawler Scrapy Mysql File Template ⭐ 153

scrapy爬虫框架模板，将数据保存到Mysql数据库或者文件中。

Kfp Tekton ⭐ 153

Kubeflow Pipelines on Tekton

Plombery ⭐ 151

Python task scheduler with a user-friendly web UI

Open Solution Toxic Comments ⭐ 151

Open solution to the Toxic Comment Classification Challenge

Scrapy_demo ⭐ 150

all kinds of scrapy demo

Peekingduck ⭐ 150

A modular framework built to simplify Computer Vision inference workloads.

Gatk Sv ⭐ 148

A structural variation pipeline for short-read sequencing

The Python Spectroscopic Data Reduction Pipeline

🔊 Play sounds while and after shell jobs complete

Semsegpipeline ⭐ 145

A simpler way of reading and augmenting image segmentation data into TensorFlow

Virsorter2 ⭐ 143

customizable pipeline to identify viral sequences from (meta)genomic data

Skinner ⭐ 139

Skin export / import tools for Autodesk Maya

Dna Seq Gatk Variant Calling ⭐ 138

This Snakemake pipeline implements the GATK best-practices workflow

Automated Tool for Optimized Modelling

Comparative Annotation Toolkit ⭐ 137

Atac_dnase_pipelines ⭐ 135

ATAC-seq and DNase-seq processing pipeline

Dropseqpipe ⭐ 134

A SingleCell RNASeq pre-processing snakemake workflow

Ifc Pipeline ⭐ 134

Processing queue and front-end for visualizing BIM models with IfcOpenShell, Docker Compose and Flask

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