Augur
Pipeline components for real-time phylodynamic analysis
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Augur | 217 | | 1 | 3 months ago | 97 | November 07, 2023 | 240 | agpl-3.0 | Python | |
| Pipeline components for real-time phylodynamic analysis | ||||||||||
| Hgtector | 87 | 7 months ago | 13 | bsd-3-clause | Python | |||||
| HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns. | ||||||||||
| Ltrpred | 31 | 2 years ago | 6 | gpl-2.0 | R | |||||
| De novo annotation of young retrotransposons | ||||||||||
| Busco_phylogenomics | 26 | 6 months ago | 1 | mit | Python | |||||
| BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins | ||||||||||
| Scripts_for_gb | 12 | 3 years ago | 1 | Perl | ||||||
| The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants". | ||||||||||
| Recenthgt | 5 | 5 years ago | 3 | mit | Python | |||||
| A novel bioinformatics pipeline for recent horizontal gene transfer detecting. | ||||||||||
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Python
Pipeline
Evolution