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Search results for ngs metagenomics
metagenomics
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ngs
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17 search results found
Training Material
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284
A collection of Galaxy-related training material
Ngless
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141
NGLess: NGS with less work
Recentrifuge
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83
Recentrifuge: robust comparative analysis and contamination removal for metagenomics
Catch
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63
A package for designing compact and comprehensive capture probe sets.
Fastv
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56
An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.
Grabseqs
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44
A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
Fastq Screen
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42
Detecting contamination in NGS data and multi-species analysis
Struo2
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42
Scalable creating/updating of metagenome profiling databases
Struo
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40
Ley Lab MetaGenome Profiler DataBase generator
Pathogentrack
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22
A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.
Tracespipe
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16
Reconstruction and analysis of viral and host genomes at multi-organ level
Snikt
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14
Sequence-independent identification and removal of adapters/systemic contamination in shotgun sequencing data. https://doi.org/10.1093/bioinformatics/btac389
Jovian
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12
Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.
Bioinformatics
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10
A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common DNA and RNA sequence analysis methods.
Assnake
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10
Snakemake based framework for NGS data analysis and management
Esviritu
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7
Read mapping pipeline for detection and measurement of virus pathogens from metagenomic or clinical data
Knime_seqan_workflows
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5
KNIME example workflows for NGS data analysis with SeqAn apps.
Megapath
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5
MegaPath: sensitive and rapid pathogen detection using metagenomic NGS data; MegaPath-Amplicon: filtering module for metagenomic amplicon data
Related Searches
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Fastq Ngs (78)
Genomics Ngs (76)
1-17 of 17 search results
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