Awesome Open Source

Programming Languages

Search results for bioinformatics bam files

bioinformatics x

12 search results found

Msisensor ⭐ 99

microsatellite instability detection using tumor only or paired tumor-normal data

Bioalignments.jl ⭐ 51

Sequence alignment tools

📇 Retrieve data in genomic intervals with a Python interface for tabix.

Covtobed ⭐ 36

⛰ covtobed | Convert the coverage track from a BAM file into a BED file

Picardmetrics ⭐ 34

🚦 Run Picard on BAM files and collate 90 metrics into one file.

Gonetics ⭐ 30

Go / Golang Bioinformatics Library

Parse and process SAM and BAM formatted files

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

Ribotish ⭐ 16

Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data

Readdatastores.jl ⭐ 10

Datastores for reads, not your papa's FASTQ files.

Split a BAM file by haplotype support

A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments.

Related Searches

Python Bioinformatics (1,701)

Bioinformatics Genomics (541)

R Bioinformatics (490)

Bioinformatics Genome (445)

C Plus Plus Bioinformatics (261)

Bioinformatics Sequencing (238)

Bioinformatics Fasta (223)

Bioinformatics Biology (197)

C Bioinformatics (192)

Bioinformatics Dna (191)

1-12 of 12 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.