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The Top 23 Reproducibility Open Source Projects

Open source projects categorized as Reproducibility
Categories > Science > Reproducibility
Git Ghost ⭐ 64
Synchronize your working directory efficiently to a remote place without committing the changes.
total releases 7most recent commit 2 years ago
Ml For Science Reproducibility Tutorial ⭐ 64
Increase citations, ease review & collaboration A collection of "easy wins" to make machine learning in research reproducible. This tutorial focuses on basics that work. Getting you 90% of the way to top-tier reproducibility.
most recent commit 3 months ago
Biosimspace ⭐ 64
Code and resources for the EPSRC BioSimSpace project.
most recent commit a year ago
Postr ⭐ 63
Prepare reproducible R Markdown posters
most recent commit 6 years ago
Rna Seq Kallisto Sleuth ⭐ 63
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
most recent commit 4 months ago
Repeatr ⭐ 62
Repeatr: Reproducible, hermetic Computation. Provision containers from Content-Addressable snapshots; run using familiar containers (e.g. runc); store outputs in Content-Addressable form too! JSON API; connect your own pipelines! (Or, use github.com/polydawn/stellar for pipelines!)
total releases 1most recent commit 4 years ago
Dmriprep ⭐ 61
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
total releases 8most recent commit 5 months ago
Quantifying Independently Reproducible Ml ⭐ 61
most recent commit 5 years ago
Targets Shiny ⭐ 60
Example Shiny app containing a targets pipeline.
most recent commit 7 months ago
Drake Examples ⭐ 58
Example workflows for the drake R package
most recent commit 2 years ago
Wrattler ⭐ 57
total releases 7most recent commit a year ago
Drake ⭐ 57
The user manual for the drake R package
most recent commit 3 years ago
Rddj Template ⭐ 56
A template for bootstrapping reproducible RMarkdown documents for data journalistic purposes.
most recent commit 10 months ago
Reproduce Stock Market Direction Random Forests ⭐ 56
Reproduce research from paper "Predicting the direction of stock market prices using random forest"
most recent commit 6 years ago
Halfpipe ⭐ 56
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
most recent commit 3 months ago
Repro In Cs ⭐ 56
Tracking Responses to the "Reproducibility in Computer Science" Repository (http://reproducibility.cs.arizona.edu/)
most recent commit 10 years ago
Tagme Reproducibility ⭐ 55
Reproducibility of the TAGME entity linking system
most recent commit 5 years ago
Multipy ⭐ 52
Multiple hypothesis testing in Python
total releases 7most recent commit 3 years ago
Rworkflows ⭐ 50
Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.
total releases 1most recent commit 4 months ago
Analysis Ui ⭐ 50
Front-end for Conveyal Analysis. Model and analyze transport scenarios.
dependent packages 4total releases 40most recent commit 2 years agonpm @conveyal/analysis-ui} Downloads
Alchemy ⭐ 50
Experiments logging & visualization
dependent packages 1total releases 12most recent commit 3 years agopypi alchemy-catalyst} Downloads
Ds_for_s ⭐ 48
Materials for March 12 ENAR short course on Data Science for Statisticians
most recent commit 7 years ago
Tensorhub ⭐ 48
TensorHub is a library built on top of TensorFlow 2.0 to provide simple, modular and repeatable abstractions to accelerate deep learning research.
total releases 6most recent commit a year ago
The 7 Latest Releases In Reproducibility Open Source Projects
Walrus ⭐ 11
Containerized data analysis pipelines
total releases 1latest release June 13, 2018most recent commit 6 years ago
Savefig ⭐ 24
Save matplotlib figures with embedded metadata for reproducibility and profit
total releases 4latest release May 25, 2017most recent commit 7 years ago
Aplore3 ⭐ 7
[R package]: Datasets from "Applied Logistic Regression" by Hosmer D.W., Lemeshow S. and Sturdivant X.
dependent packages 1total releases 2latest release October 20, 2016most recent commit 7 years ago
Ggghost ⭐ 48
:ghost: Capture the spirit of your ggplot call
dependent packages 1total releases 3latest release August 20, 2016most recent commit 6 years ago
Dimebox ⭐ 9
Job creator and monitor for high-performance computing clusters.
dependent packages 2total releases 2latest release June 16, 2016most recent commit 6 years agonpm dimebox} Downloads
Wdl ⭐ 706
Workflow Description Language - Specification and Implementations
total releases 20latest release January 25, 2016most recent commit 3 months ago
Bento ⭐ 148
A tool to nicely wrap-up your python softwares
total releases 7latest release June 24, 2012most recent commit 9 years ago
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