Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 23 R Ngs Open Source Projects

Open source projects categorized as R Ngs
Ngsplot ⭐ 231
Quick mining and visualization of NGS data by integrating genomic databases
most recent commit a year ago
Scde ⭐ 163
R package for analyzing single-cell RNA-seq data
most recent commit a year ago
Ngstools ⭐ 142
Programs to analyse NGS data for population genetics purposes
most recent commit 9 months ago
Clincnv ⭐ 65
Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
most recent commit 5 months ago
Systempiper ⭐ 45
Project Website:
most recent commit 6 months ago
Needlestack ⭐ 39
Multi-sample somatic variant caller
most recent commit 4 years ago
Mapdamage ⭐ 37
mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
total releases 1most recent commit 8 months ago
Oxbow ⭐ 32
Read specialized NGS formats as data frames in R, Python, and more.
dependent packages 2total releases 3most recent commit 4 months agopypi oxbow} Downloads
Qtlseqr ⭐ 28
QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
most recent commit 4 years ago
Csbb Shiny ⭐ 28
Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics analysis
most recent commit a year ago
Ngs Filters ⭐ 25
Filters for false-positive mutation calls in NGS
most recent commit 5 years ago
Rna Seq Tutorial For Gene Differential Expression Analysis ⭐ 24
This tutorial is created for educational purpose
most recent commit 4 months ago
Ngstools ⭐ 23
My own tools code for NGS data analysis (Next Generation Sequencing)
most recent commit 5 years ago
Updog ⭐ 20
Flexible Genotyping of Polyploids using Next Generation Sequencing Data
most recent commit 5 months ago
Ngspipe2go ⭐ 19
a set of NGS pipelines
most recent commit 7 months ago
Ctdnatools ⭐ 17
R package to work with ctDNA sequencing data
total releases 1most recent commit 2 years ago
Copenhagen ⭐ 17
Analysis of genotyping and next-generation sequencing data in medical and population genetics
most recent commit 2 years ago
Ngstk ⭐ 15
A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.
dependent packages 1total releases 5most recent commit 5 years ago
Rctl ⭐ 14
A set of command line tools based on R and JavaScript.
most recent commit 4 years ago
Rnaseq ⭐ 13
RNA-seq, QC and differential analysis pipeline
most recent commit 4 months ago
Nu Ngs01 ⭐ 13
NGS-1 Data analysis course
most recent commit 3 years ago
Angsd Wrapper ⭐ 13
Utilities for analyzing next generation sequencing data.
most recent commit 4 years ago
Ebaii ⭐ 12
Supports de cours de l'Ecole de Bioinformatique Aviesan - IFB - Inserm "Initiation au traitement des données de génomique obtenues par séquençage à haut débit"
most recent commit 6 months ago
The 2 Most Depended On R Ngs Open Source Projects
Oxbow ⭐ 32
Read specialized NGS formats as data frames in R, Python, and more.
dependent packages 2total releases 3latest release October 26, 2023most recent commit 4 months agopypi oxbow} Downloads
Ngstk ⭐ 15
A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.
dependent packages 1total releases 5latest release November 22, 2018most recent commit 5 years ago
The 4 Latest Releases In R Ngs Open Source Projects
Oxbow ⭐ 32
Read specialized NGS formats as data frames in R, Python, and more.
dependent packages 2total releases 3latest release October 26, 2023most recent commit 4 months agopypi oxbow} Downloads
Mapdamage ⭐ 37
mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
total releases 1latest release June 18, 2021most recent commit 8 months ago
Ctdnatools ⭐ 17
R package to work with ctDNA sequencing data
total releases 1latest release March 04, 2020most recent commit 2 years ago
Ngstk ⭐ 15
A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.
dependent packages 1total releases 5latest release November 22, 2018most recent commit 5 years ago
Popular Science Categories
Physics
Genome
Scientific
Medical
Genomics
Sequencing
Molecule
Evolution
Astronomy
Dna
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.