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The Top 23 R Genomics Open Source Projects

Open source projects categorized as R Genomics
Tenxbraindata ⭐ 7
An ExperimentHub package for the 1.3 million brain cell 10X single-cell RNA-seq data set.
most recent commit 6 months ago
Pathifier Tool Kit ⭐ 7
Scripts to help you use PATHIFIER (Drier et al., 2013)
most recent commit a year ago
Genestructuretools ⭐ 7
most recent commit 3 years ago
Bands ⭐ 7
Simple interactive chromosome maps written in R
most recent commit 4 years ago
Moire ⭐ 7
MOI and Allele Frequency Recovery from Noisy Polyallelic Genetics Data
most recent commit 4 months ago
Gemma.r ⭐ 7
An R wrapper for the Gemma RESTful API
most recent commit 6 months ago
Imix ⭐ 7
Integrative genomics using a multivariate mixture model framework
total releases 3most recent commit a year ago
Gwastutorial ⭐ 7
Genome-wide association studies tutorial 🧬
most recent commit 4 years ago
Agebioportal ⭐ 7
R Shiny web application for aging-related diseases
most recent commit 6 years ago
Copynumberplots ⭐ 6
R package to create plots representing copy number data using karyoploteR
most recent commit 7 months ago
Unmasc ⭐ 6
Tumor-only variant calling
most recent commit 6 months ago
Genbase ⭐ 6
Code for GenBase: complex analytics based genomics benchmark
most recent commit 9 years ago
Cacao_genomics ⭐ 6
This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes
most recent commit 6 years ago
Brgenomics ⭐ 6
Tools for efficient analysis of high resolution genomics data in R
most recent commit a year ago
Gbic ⭐ 6
R packages developed by Groningen BioInformatics Centre
most recent commit 11 years ago
Sclane ⭐ 6
Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
most recent commit 4 months ago
October_2016 ⭐ 6
Planning repository for Genomics Hackathon in Vancouver
most recent commit 7 years ago
Sbg Cgc_course2018 ⭐ 6
IARC course on analyzing TCGA data in the SevenBridges Genomics CancerGenomicsCloud (SBG-CGC)
most recent commit 6 years ago
Canvasxpress Js ⭐ 6
CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.
most recent commit 3 months ago
Kalis ⭐ 6
kalis: High Performance Li & Stephens Local Ancestry Inference
most recent commit 5 months ago
Pareben ⭐ 5
Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R
most recent commit 2 years ago
Gbsapp ⭐ 5
Automated Pipeline for Variant/Haplotype Calling and Filtering
most recent commit 4 months ago
Raids ⭐ 5
Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms
most recent commit 7 months ago
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