Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Galaxy | 1,211 | 2 | 23 | 3 months ago | 30 | December 08, 2023 | 2,169 | other | Python | |
Data intensive science for everyone. | ||||||||||
Ugene | 190 | 3 months ago | 6 | gpl-2.0 | C++ | |||||
UGENE is free open-source cross-platform bioinformatics software | ||||||||||
3d Dna | 176 | 5 months ago | 50 | mit | Shell | |||||
3D de novo assembly (3D DNA) pipeline | ||||||||||
Dna Seq Gatk Variant Calling | 138 | 3 years ago | 10 | mit | Python | |||||
This Snakemake pipeline implements the GATK best-practices workflow | ||||||||||
Eager | 112 | 4 months ago | 59 | mit | Nextflow | |||||
A fully reproducible and state-of-the-art ancient DNA analysis pipeline | ||||||||||
Animationdna | 75 | 4 years ago | 1 | Python | ||||||
Maya > Arnold > Nuke pipeline | ||||||||||
Methpipe | 63 | 2 years ago | 34 | C++ | ||||||
A pipeline for analyzing DNA methylation data from bisulfite sequencing. | ||||||||||
Deepvariant | 38 | 3 years ago | n,ull | mit | Nextflow | |||||
Google's DeepVariant variant caller as a Nextflow pipeline | ||||||||||
Hlatyping | 34 | 2 years ago | 3 | mit | Nextflow | |||||
Precision HLA typing from next-generation sequencing data | ||||||||||
Ltrpred | 31 | 2 years ago | 6 | gpl-2.0 | R | |||||
De novo annotation of young retrotransposons |