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Aloft

ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the human genome.
Stars
13
License
cc0-1.0
Open Issues
1
Most Recent Commit
5 years ago
Programming Language
Python
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Repo
Alternatives To Aloft
Project NameStarsDownloadsRepos Using ThisPackages Using ThisMost Recent CommitTotal ReleasesLatest ReleaseOpen IssuesLicenseLanguage
Vcfanno33417 months ago41November 29, 202233mitGo
annotate a VCF with other VCFs/BEDs/tabixed files
Nirvana158
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The nimble & robust variant annotator
23andme2vcf82
5 years ago7mitPerl
convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf
Bgt76
5 years ago5mitC
Flexible genotype query among 30,000+ samples whole-genome
Jannovar51455 months ago27September 13, 202232otherJava
Annotation of VCF variants with functional impact and from databases (executable+library)
Vcf2db50
3 years ago24mitPython
create a gemini-compatible database from a VCF
Vembrane50
8 months ago31July 26, 20235mitPython
vembrane filters VCF records using python expressions
Gvanno43
6 months agoPython
Generic human DNA variant annotation pipeline
2vcf29
5 years ago5mitGo
www.openb.io/2vcf convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
Seqminer28387 months ago39September 02, 202318otherC
Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
Alternatives To Aloft
Select To Compare
Vcfanno ⭐ 334
annotate a VCF with other VCFs/BEDs/tabixed files
dependent packages 1total releases 41most recent commit 7 months ago
Vembrane ⭐ 50
vembrane filters VCF records using python expressions
total releases 31most recent commit 8 months ago
Seqminer ⭐ 28
Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
dependent packages 8total releases 39most recent commit 7 months ago


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Alternative Project Comparisons
Aloft vs Vcfanno
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Aloft vs Bgt
Aloft vs Jannovar
Aloft vs Vcf2db
Aloft vs Vembrane
Aloft vs Gvanno
Aloft vs 2vcf
Aloft vs Seqminer
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