Cecret
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Krakenuniq | 201 | 5 months ago | 107 | gpl-3.0 | C++ | |||||
| 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results | ||||||||||
| Cecret | 36 | 5 months ago | 4 | mit | Nextflow | |||||
| Reference-based consensus creation | ||||||||||
| Kraken Biom | 33 | 2 | 2 years ago | 1 | August 31, 2016 | 7 | mit | Python | ||
| Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken). | ||||||||||
| Csis | 21 | 2 years ago | mit | |||||||
| Code Safety Inspection Service | ||||||||||
| Metasub_cap | 16 | 4 years ago | 8 | mit | Python | |||||
| A comprehensive pipeline for short read metagenomic data | ||||||||||
| Scrubby | 7 | a year ago | 3 | apache-2.0 | Rust | |||||
| Background depletion/extraction using k-mer and/or alignment methods :panda_face: | ||||||||||
| Pipelines | 5 | a year ago | 1 | |||||||
| Conveyor-based analysis pipelines for metagenome data | ||||||||||
| Stringmeup | 5 | 4 years ago | mit | Python | ||||||
| A post-processing tool to reclassify Kraken 2 output based on the confidence score and/or minimum minimizer hit groups. | ||||||||||
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