Project Name	Stars	Most Recent Commit	Total Releases	Latest Release	Open Issues	License	Language
Seqan	444	3 months ago			107	other	C++
SeqAn's official repository.
Abpoa	99	3 months ago	28	March 15, 2022	15	mit	C
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Opal	24	2 years ago			20	mit	C++
SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global)
Abpoa	10	3 years ago				mit	C
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Pyopal	6	3 months ago				mit	Python
Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.

Alternatives To Opal

Select To Compare

Seqan ⭐ 444

SeqAn's official repository.

most recent commit 3 months ago

Abpoa ⭐ 99

abPOA: an SIMD-based C library for fast partial order alignment using adaptive band

total releases 28most recent commit 3 months ago

Opal ⭐ 24

SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global)

most recent commit 2 years ago

Abpoa ⭐ 10

abPOA: an SIMD-based C library for fast partial order alignment using adaptive band

most recent commit 3 years ago

Pyopal ⭐ 6

Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.

most recent commit 3 months ago

Suggest An Alternative To opal

Alternative Project Comparisons

Opal vs Seqan

Opal vs Abpoa

Opal vs Pyopal

Popular Simd Projects

Ncnn ⭐ 19,097

ncnn is a high-performance neural network inference framework optimized for the mobile platform

dependent packages 1total releases 26latest release October 27, 2023most recent commit 25 days ago

Simdjson ⭐ 18,377

Parsing gigabytes of JSON per second : used by Facebook/Meta Velox, the Node.js runtime, ClickHouse, WatermelonDB, Apache Doris, Milvus, StarRocks

total releases 25latest release August 10, 2022most recent commit 8 days ago

Questdb ⭐ 13,178

An open source time-series database for fast ingest and SQL queries

dependent packages 3total releases 79latest release November 24, 2023most recent commit 3 months ago

John ⭐ 9,237

John the Ripper jumbo - advanced offline password cracker, which supports hundreds of hash and cipher types, and runs on many operating systems, CPUs, GPUs, and even some FPGAs

most recent commit 16 days ago

Entitycomponentsystemsamples ⭐ 6,506

most recent commit 3 months ago

Popular Sequence Alignment Projects

Biopython ⭐ 3,918

Official git repository for Biopython (originally converted from CVS)

dependent packages 1,373total releases 58latest release February 13, 2023most recent commit 3 months ago

Minimap2 ⭐ 1,613

A versatile pairwise aligner for genomic and spliced nucleotide sequences

dependent packages 32total releases 27latest release December 26, 2021most recent commit 3 months ago

Bwa ⭐ 1,282

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

total releases 1latest release March 03, 2021most recent commit a year ago

Diamond ⭐ 900

Accelerated BLAST compatible local sequence aligner.

most recent commit 4 months ago

Jcvi ⭐ 650

Python library to facilitate genome assembly, annotation, and comparative genomics

dependent packages 1total releases 97latest release August 30, 2023most recent commit 4 months ago

Popular Hardware Categories