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Search results for vcf files
vcf-files
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18 search results found
Vcf2phylip
⭐
216
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Learning_vcf_file
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122
Learning the Variant Call Format
Gcp Variant Transforms
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114
GCP Variant Transforms
Rvtests
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95
Rare variant test software for next generation sequencing data
Snpgenie
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94
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
Mungesumstats
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59
Rapid standardisation and quality control of GWAS or QTL summary statistics
Vcfstats
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48
Powerful statistics for VCF files
Vcf Simplify
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45
A python parser to simplify and build the VCF (Variant Call Format).
Phenomenet Vp
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17
A phenotype-based tool for variant prioritization in WES and WGS data
Starfish
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17
Intersect multiple VCF files with haplotype awareness
Spark Vcf
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15
Spark VCF data source implementation for Dataframes
Virheat
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9
Visualize microbial evolution at the SNP level!
Cate
⭐
8
A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.
Variantcallformat.jl
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8
Read and write VCF and BCF files
Bamdash
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6
create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks
Ebt
⭐
6
Evolutionary Bioinformatics Toolkit (EBT)
Mobicnv
⭐
6
CNV analysis based on the depth of coverage of Illumina data
Plot Vcf
⭐
5
visual analysis of your VCF files
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1-18 of 18 search results
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