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Search results for vcf ngs
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23 search results found
Htslib
⭐
762
C library for high-throughput sequencing data formats
Htsjdk
⭐
271
A Java API for high-throughput sequencing data (HTS) formats.
Mutscan
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127
Detect and visualize target mutations by scanning FastQ files directly
Ngscheckmate
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106
Software program for checking sample matching for NGS data
Haplogrep Cmd
⭐
64
HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
Opengene.jl
⭐
61
(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia
Snpsplit
⭐
43
Allele-specific alignment sorting
Disq
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31
A library for manipulating bioinformatics sequencing formats in Apache Spark
Rnaseq Nf
⭐
20
RNAseq analysis pipeline
Alignment Nf
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18
Whole Exome/Whole Genome Sequencing alignment pipeline
Svcollector
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17
Method to optimally select samples for validation and resequencing
Garfield Ngs
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16
GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS
Scripts
⭐
14
Scripts to handle NGS data and other biological data
Groovy Ngs Utils
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12
A collection of utilities for working with next generation (MPS) sequencing data in Groovy
Variantconvert
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9
A customizable genetic variants file format converter.
Pythonngstools
⭐
9
Scripts for NGS processing
Malva
⭐
7
genotyping by Mapping-free ALternate-allele detection of known VAriants
Ngs_server
⭐
7
Ultra Lightweight NGS (BAM/VCF) Server
Ngshelper
⭐
6
NGShelper is a set of tools useful to performance some tasks related to NGS analysis.
Unmasc
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6
Tumor-only variant calling
Vizsnp St
⭐
5
Visualizing the effect of SNPs on protein structure using iCn3D
Recallme
⭐
5
Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer
Ephagen
⭐
5
Estimate NGS Dataset qualitity in terms of its ability to detect mutations of predefined spectrum
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1-23 of 23 search results
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