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Search results for genomics sam

11 search results found

Nucleus ⭐ 675

Python and C++ code for reading and writing genomics data.

A Java API for high-throughput sequencing data (HTS) formats.

Genozip ⭐ 144

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

A DNA Sequence Alignment/Map (SAM) library for Clojure

Estimating k-mer coverage histogram of genomics data

Simplesam ⭐ 55

Simple pure Python SAM parser and objects for working with SAM records

A library for manipulating bioinformatics sequencing formats in Apache Spark

Hts Python ⭐ 18

pythonic wrapper for htslib

Arrowsam ⭐ 14

Genomics datastructures using Apache Arrow

Edgecase ⭐ 13

A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.

Ruby Htslib ⭐ 7

HTSlib bindings for Ruby

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