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Search results for ruby bioinformatics
bioinformatics
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ruby
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20 search results found
Bioruby
⭐
369
bioruby
Arvados
⭐
354
An open source platform for managing and analyzing biomedical big data
Homebrew Bio
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292
🍺🔬 Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
Genometools
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261
GenomeTools genome analysis system.
Sequenceserver
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259
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
Flo
⭐
82
Same species annotation lift over pipeline.
Oswitch
⭐
75
Provides access to complex Bioinformatics software (even BioLinux!) in just one command.
Genevalidator
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41
GeneValidator: Identify problems with predicted genes
Miga
⭐
29
MiGA: Microbial Genomes Atlas
Homebrew Bioinformatics Linux
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26
🍺 🐧 Homebrew formulae for bioinformatics software only available for Linux
Ontologies
⭐
16
Home of the Genomic Feature and Variation Ontology (GFVO)
99problems
⭐
15
99 problems in different languages
Goo
⭐
15
Graph Oriented Objects (GOO) for Ruby. A RDF/SPARQL based ORM.
Ruby Minimap2
⭐
13
Powerful long read aligner for Ruby
Bigbio
⭐
11
Big data bioinformatics repository
Iroki_cli
⭐
9
NOTE: The iroki command line tool is no longer maintained. Please see: https://github.com/mooreryan/iroki
Nucleotides Data
⭐
7
Structured input data for nucleotid.es bioinformatics software benchmarking
Ruby Htslib
⭐
7
HTSlib bindings for Ruby
Dgidb V5
⭐
6
Providing interactions between drugs and genes sourced from a variety of publications and knowledgebases
Clinical_variant_database
⭐
5
Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensembl dataset. Originally developed as part of a Masters in Bioinformatics project @ University of Exeter
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