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7 search results found
Impute Me
⭐
92
This is the code behind the www.impute.me site. It contains algorithms for personal genome analysis, including imputation and polygenic risk score calculation
Snprelate
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90
R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)
Gwasrapidd
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78
gwasrapidd: an R package to query, download and wrangle GWAS Catalog data
Magma_celltyping
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50
Find causal cell-types underlying complex trait genetics
Rsnps
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47
Wrapper to a number of SNP web APIs
Seqarray
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41
Data management of large-scale whole-genome sequence variant calls (Development version only)
Hibag
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23
R package – HLA Genotype Imputation with Attribute Bagging (development version only)
Proxysnps
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21
🔖 Get SNP proxies from the 1000 Genomes Project.
Gwastools
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13
Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
Bnasnpdb
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12
An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
Maizesnpdb
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11
A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
Piranha
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8
Scripts for file processing and analysis in phylogenetics and phylogeography
Locusexplorer
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8
An interactive graphical illustration of genetic associations and their biological context
River
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7
R package for RIVER (RNA-Informed Variant Effect on Regulation)
Rdna Nexus
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5
Functions to analyse UK Biobank genetic data directly from DNA Nexus' RStudio Workbench
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