Awesome Open Source

Programming Languages

Search results for python multi omics

6 search results found

Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

Proteomics Sample Metadata ⭐ 65

The Proteomics Experimental Design file format: Standard for experimental design annotation

MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

Read specialized NGS formats as data frames in R, Python, and more.

Pyrovelocity ⭐ 31

𝒫robabilistic modeling of RNA velocity ⬱

Openomics ⭐ 23

A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.

Gnn Subnet ⭐ 16

Disease subnetwork detection with explainable Graph Neural Networks

Flexible omics pipeline

Omiembed ⭐ 12

Multi-task deep learning framework for multi-omics data analysis

Sdrf Pipelines ⭐ 12

A repository to convert SDRF proteomics files into pipelines config files

SIMBA: SIngle-cell eMBedding Along with features

MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data

MOGONET (Multi-Omics Graph cOnvolutional NETworks) is multi-omics data integrative analysis framework for classification tasks in biomedical applications.

MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dominik Heider, and Georges Hattab

Related Searches

Python Django (28,897)

Python Machine Learning (20,195)

Python Flask (17,643)

Python Script (17,074)

Python Dataset (14,792)

Python Docker (14,113)

Python Tensorflow (13,736)

Python Command Line (13,351)

Python Deep Learning (13,092)

Python Jupyter Notebook (12,976)

1-6 of 6 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.