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Search results for multi omics
multi-omics
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36 search results found
Scarches
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294
Reference mapping for single-cell genomics
Muon
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198
muon is a multimodal omics Python framework
Scarf
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83
Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.
Mudata
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68
Multimodal Data (.h5mu) implementation for Python
Proteomics Sample Metadata
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65
The Proteomics Experimental Design file format: Standard for experimental design annotation
Maui
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47
Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
Move
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44
MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
Babel
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32
Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
Oxbow
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32
Read specialized NGS formats as data frames in R, Python, and more.
Pyrovelocity
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31
𝒫robabilistic modeling of RNA velocity ⬱
Mowgli
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31
Single-cell multi-omics integration using Optimal Transport
Scmega
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28
scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference
Melonnpan
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24
Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles
Openomics
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23
A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
Timeomics
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21
Time-Course Multi-Omics data integration
Omicspls
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20
R package for High dimensional data analysis and integration with O2PLS!
Gnn Subnet
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16
Disease subnetwork detection with explainable Graph Neural Networks
Muon.jl
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16
Muon for Julia
Omicssuite.github.io
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15
OmicsSuite website for releasing new version.
Mudataseurat
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14
.h5mu files interface for Seurat
Ymp
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13
Flexible omics pipeline
Omiembed
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12
Multi-task deep learning framework for multi-omics data analysis
Sdrf Pipelines
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12
A repository to convert SDRF proteomics files into pipelines config files
Bacnet
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12
BACNET is a Java based platform to develop website for multi-omics analysis
Timeor
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11
TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
Pymultiomics
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9
Python toolbox for multi-omics data mapping and analysis
Hummus
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9
Molecular interactions inference from single-cell multi-omics data
Simba
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9
SIMBA: SIngle-cell eMBedding Along with features
Mercat2
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6
MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
Integratedlearner
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6
Integrated Machine Learning for Multi-omics Classification and Prediction
Odg
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5
ODG: Omics Database Generator - Integration toolkit for -omics data
Multi Omics State Of The Field
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5
Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
Movis
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5
MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dominik Heider, and Georges Hattab
Motrpacrattraining6mo
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5
Analysis of the MoTrPAC endurance exercise training study in 6-month-old rats
Redeemr
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5
R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.
Mogonet
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5
MOGONET (Multi-Omics Graph cOnvolutional NETworks) is multi-omics data integrative analysis framework for classification tasks in biomedical applications.
1-36 of 36 search results
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