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Search results for protein structure structural biology
protein-structure
x
structural-biology
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24 search results found
Graphein
⭐
932
Protein Graph Library
Molecularnodes
⭐
729
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Sidechainnet
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256
An all-atom protein structure dataset for machine learning.
Lightdock
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234
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Gemmi
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180
macromolecular crystallography library and utilities
Ssbio
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96
A Python framework for structural systems biology
Biostructures.jl
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77
A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
Imp
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64
The Integrative Modeling Platform
Toolkit
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57
The MPI Bioinformatics Toolkit
Vscoding Sequence
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56
VSCode Extension for interactively visualising protein structure data in the editor
Bio3dview.jl
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32
A Julia package to view macromolecular structures in the REPL, in a Jupyter notebook/JupyterLab or in Pluto
Packman
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28
PACKMAN: PACKing and Motion ANalysis
Mdciao
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26
mdciao: Analysis of Molecular Dynamics Simulations Using Residue Neighborhoods
Protein Transformer
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25
Predicting protein structure through sequence modeling
De Stress
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13
DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
Pmi
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12
Python Modeling Interface
Funfoldesdata
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12
Rosetta FunFolDes – a general framework for the computational design of functional proteins.
Zincbinddb
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10
The database and API backend for ZincBind - the database of zinc binding sites
Pymissense
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9
PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
Peppy
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7
A VR app which allows creation and manipulation of dynamic models of polypeptides. Focus is fun and learning.
Surfstamp Public
⭐
7
3D Printer Compatible Molecular Surface Representation (Do not clone! Everything is in the release page!)
Unity Protein Visualization
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6
Protein Visualization using Unity and C# analysis on PDB Files.
Gdock
⭐
6
Protein-Protein Docking using Genetic Algorithm
Rmf
⭐
6
The library to support reading and writing of RMF files.
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Python Protein Structure (111)
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