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Paddlehelix ⭐ 729

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

Official implementation of SaProt.

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

Holoprot ⭐ 37

Multi-Scale Representation Learning on Proteins (NeurIPS 2021)

Phage Host Prediction ⭐ 7

Published in PLOS ONE. We show that using embeddings of receptor-binding proteins presents improvements over handcrafted genomic and protein sequence features for phage-host interaction prediction — with the highest performance obtained using the transformer-based protein language model ProtT5

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