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13 search results found
Virsorter2
⭐
143
customizable pipeline to identify viral sequences from (meta)genomic data
Viralrecon
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101
Assembly and intrahost/low-frequency variant calling for viral samples
Emg Viral Pipeline
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98
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
Zika Rnaseq Pipeline
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73
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study
Vip
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22
Tracespipe
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16
Reconstruction and analysis of viral and host genomes at multi-organ level
Metavic
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15
Virus metagenomic pipeline for unknown host or in absence of a host genome
Micall
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14
Pipeline for processing FASTQ data from an Illumina MiSeq to genotype human RNA viruses like HIV and hepatitis C
Zika Seq
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12
Pipelines to do MinION sequencing of Zika virus
Vipr
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10
Assembly and intrahost / low-frequency variant calling for viral samples
Viralintegration
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9
Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.
Ebola Predictor
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8
Prediction pipeline to generate prognosis predictors for Ebola Virus Disease
Coronalytics
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7
A full ETL pipeline to visualize the corona virus outbreak.
Sars Cov2_analysis
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5
Documentation for analyzing SARS-Cov2 samples.
Fenrir
⭐
5
RNA-seq pipeline to detect viral reads
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1-13 of 13 search results
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