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Search results for microbiota
microbiota
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10 search results found
Tools Microbiome Analysis
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95
A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
Microviz
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80
R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
Micom
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73
Python package to study microbial communities using metabolic modeling.
Ggpicrust2
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59
Make Picrust2 Output Analysis and Visualization Easier
Microbial Bioinformatics Introductory Course Material 2018
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12
Course material for OPEN & REPRODUCIBLE MICROBIOME DATA ANALYSIS SPRING SCHOOL
Framework
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10
Open-source opinionated Galaxy-based framework for microbiota analysis
16s Rdna V3 V4
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8
16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/
Beexact
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5
Improved bee microbiota characterization using routine 16S rRNA gene sequencing 🐝🧬
Dysbiosisr
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5
The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures
Ribotaxa
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5
RiboTaxa: combined approaches for rRNA genes taxonomic resolution down to the species level from metagenomics data revealing novelties.
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Microbiome Analysis Microbiota (3)
16s Microbiota (3)
Phyloseq Microbiota (3)
Illumina Microbiota (3)
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