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5 search results found
Microviz
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80
R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
Ggpicrust2
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59
Make Picrust2 Output Analysis and Visualization Easier
Microbial Bioinformatics Introductory Course Material 2018
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12
Course material for OPEN & REPRODUCIBLE MICROBIOME DATA ANALYSIS SPRING SCHOOL
16s Rdna V3 V4
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8
16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/
Dysbiosisr
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5
The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures
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