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Search results for microbiome 16s

9 search results found

Ampliseq ⭐ 141

Amplicon sequencing analysis workflow using DADA2 and QIIME2

Rdptools ⭐ 36

Collection of commonly used RDP Tools for easy building

Compare different differential abundance and expression methods

Microbiomeutilities ⭐ 29

The is mostly a wrapper tool using phyloseq and microbiome R packages.

Various functions for analysis of microbial community data

Microbiome Analysis Using R ⭐ 17

Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.

Phylotoast ⭐ 12

Tools for phylogenetic data analysis including visualization and cluster-computing support.

Companion notebooks for "Dog and human inflammatory bowel disease rely on overlapping yet distinct dysbiosis networks"

16s Rdna V3 V4 ⭐ 8

16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/

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