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The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (either at the peptide or the protein level), lipidomic, and metabolomic data.

Mhcquant ⭐ 28

Identify and quantify MHC eluted peptides from mass spectrometry raw data

Predfull ⭐ 21

This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network

Python framework for Deep Learning in Proteomics

Cyclobranch ⭐ 7

A tool for mass spectrometry data analysis.

Proteomics Mass Spectrometry Datasets for Machine Learning

Peptacular ⭐ 5

A spectacularly simple package for working with peptide sequences.

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