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peptides
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29 search results found
Lightdock
⭐
234
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Chatdrug
⭐
96
LLM for Drug Editing, ICLR 2024
Peptides
⭐
71
An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
Protr
⭐
50
🧬 Toolkit for generating various numerical features of protein sequences
Macrel
⭐
48
Predict AMPs in (meta)genomes and peptides
Deeplc
⭐
44
DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
Antigen.garnish
⭐
35
Pmartr
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34
The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (either at the peptide or the protein level), lipidomic, and metabolomic data.
Deeprtplus
⭐
30
Deep (Transfer) Learning for Peptide Retention Time Prediction
Mhcquant
⭐
28
Identify and quantify MHC eluted peptides from mass spectrometry raw data
Ribocode
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28
release version
Predfull
⭐
21
This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
Lightdock Python2.7
⭐
20
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Peptide Prediction List
⭐
18
Collects software dedicated to predicting specific properties of peptides
Dlomix
⭐
17
Python framework for Deep Learning in Proteomics
Lightdock Rust
⭐
13
A Rust implementation of the LightDock macromolecular docking software
Alphafold Peptide Receptors
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11
Identifying peptide-receptor interactions using AlphaFold-Multimer
Cleaver
⭐
9
Cleavage of polypeptide sequences
Peptools
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9
PepTools - An Immunoinformatics (Immunological Bioinformatics) R-package for working with peptide data
Anticp2
⭐
8
AntiCP2 is an updated version of AntiCP developed for predicting, designing and scanning anticancer peptides.
Prospect
⭐
7
Proteomics Mass Spectrometry Datasets for Machine Learning
Biopep
⭐
7
Search, molecular modeling and molecular docking of peptides.
Cyclobranch
⭐
7
A tool for mass spectrometry data analysis.
Mhc Peptides Prediction
⭐
6
A set of different models, that predict the degree of binding of peptide proteins.
Usmpep
⭐
5
Major Histocompatibility Complex (MHC) Binding Affinity Prediction
Epitopefindr
⭐
5
R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.
Peptidesim
⭐
5
Automated peptide simulation tool with gromacs, gromacswrapper, plumed
Peptacular
⭐
5
A spectacularly simple package for working with peptide sequences.
Protgraph
⭐
5
ProtGraph - A Graph-Generator for Proteins
Related Searches
Python Peptides (24)
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Mass Spectrometry Peptides (11)
1-29 of 29 search results
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