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Search results for bioinformatics interaction
bioinformatics
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interaction
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20 search results found
Plip
⭐
320
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
Globalbioticinteractions
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114
Global Biotic Interactions provides access to existing species interaction datasets
Coolpuppy
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66
A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
Neodti
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54
NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions
Pathway Mapper
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52
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
Cell2cell
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44
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
Intarna
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41
Efficient target prediction incorporating accessibility of interaction sites
Rna Playground
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34
Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.
Pycontact
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34
Analysis of non-covalent interactions in MD trajectories
Arpeggio
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33
Calculation of interatomic interactions in molecular structures
Tadlib
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23
A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains
Electrostatics.github.io
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23
APBS & PDB2PQR - software for biomolecular electrostatics and solvation
Netsmooth
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18
netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation
Chia Pet_tool_v3
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13
ChIA-PET, HiChIP, PLAC-Seq data analysis, with linker detection, linker filter, or restriction process for HiChIP, mapping, call cluster and visulization
Fingernat
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12
Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.
Man
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6
Codes and data for the paper entitled "Learning representations to predict intermolecular interactions on large-scale heterogeneous molecular association network"
Rnpfind
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6
Bioinformatics tool for exploring RNA-Protein interactions
Hbind
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5
Calculates hydrogen-bond interaction tables for protein-small molecule complexes, based on protein PDB and protonated ligand MOL2 structure input. Raschka et al. (2018) J. Computer-Aided Molec. Design
Schmidt_et_al_2016_community_similarity
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5
Analysis code for a manuscript on community similarity computation
Ppaxe
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5
Text mining tool to retrieve protein-protein interactions from the scientific literature.
Vizsnp St
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5
Visualizing the effect of SNPs on protein structure using iCn3D
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1-20 of 20 search results
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