Project Name	Stars	Repos Using This	Packages Using This	Most Recent Commit	Total Releases	Latest Release	Open Issues	License	Language
Dash Cytoscape	555		2	3 months ago	9	May 25, 2021	72	mit	Python
Interactive network visualization in Python and Dash, powered by Cytoscape.js
Canvasxpress	282		4	3 months ago	43	November 08, 2023	7		R
CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.
Pybel	89	4	52	2 years ago	91	February 11, 2022	30	mit	Python
🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
Ananse	72			4 months ago			25	mit	Python
Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.
Nxontology	59		2	9 months ago	15	February 28, 2023	3	apache-2.0	Python
NetworkX-based Python library for representing ontologies
Flashweave.jl	52			10 months ago			6	other	Julia
Inference of microbial interaction networks from large-scale heterogeneous abundance data
Graph Network Explainability	51			4 years ago					Jupyter Notebook
Explainability techniques for Graph Networks, applied to a synthetic dataset and an organic chemistry task. Code for the workshop paper "Explainability Techniques for Graph Convolutional Networks" (ICML19)
Metage2metabo	42			3 months ago	33	September 26, 2022	12	lgpl-3.0	Jupyter Notebook
From annotated genomes to metabolic screening in large scale microbiotas
Synthetic	37			a year ago				mit	Python
Symbolic Generators for Complex Networks
Safepy	34			4 months ago			4	gpl-3.0	Python
Python implementation of Spatial Analysis of Functional Enrichment (SAFE)

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Dash Cytoscape ⭐ 555

Interactive network visualization in Python and Dash, powered by Cytoscape.js

dependent packages 2total releases 9most recent commit 3 months ago

Canvasxpress ⭐ 282

CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.

dependent packages 4total releases 43most recent commit 3 months ago

Pybel ⭐ 89

🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)

dependent packages 52total releases 91most recent commit 2 years ago

Ananse ⭐ 72

Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.

most recent commit 4 months ago

Nxontology ⭐ 59

NetworkX-based Python library for representing ontologies

dependent packages 2total releases 15most recent commit 9 months ago

Flashweave.jl ⭐ 52

Inference of microbial interaction networks from large-scale heterogeneous abundance data

most recent commit 10 months ago

Graph Network Explainability ⭐ 51

Explainability techniques for Graph Networks, applied to a synthetic dataset and an organic chemistry task. Code for the workshop paper "Explainability Techniques for Graph Convolutional Networks" (ICML19)

most recent commit 4 years ago

Metage2metabo ⭐ 42

From annotated genomes to metabolic screening in large scale microbiotas

total releases 33most recent commit 3 months ago

Synthetic ⭐ 37

Symbolic Generators for Complex Networks

most recent commit a year ago

Safepy ⭐ 34

Python implementation of Spatial Analysis of Functional Enrichment (SAFE)

most recent commit 4 months ago

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