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23 search results found

Python library to facilitate genome assembly, annotation, and comparative genomics

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

Kubegene ⭐ 169

KubeGene - A turn-key Genome Sequencing workflow management framework

Viral Ngs ⭐ 129

Viral genomics analysis pipelines

Dna Seq Analysis ⭐ 128

DNA sequencing analysis notes from Ming Tang

Benchmarking Tools ⭐ 110

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

Titancna ⭐ 59

Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer

H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)

Teamteri ⭐ 50

Genomics (computational bioinformatic data analysis) running on GCP, AWS or Azure

Pan-genomic sequence analysis

Genomegraphs.jl ⭐ 29

A modern genomics framework for julia

Awesome Sequencing Tech Papers ⭐ 26

A collection of publications on comparison of high-throughput sequencing technologies.

Aceseqworkflow ⭐ 22

Allele-specific copy number estimation with whole genome sequencing

Tredparse ⭐ 17

TREDPARSE: HLI Short Tandem Repeat (STR) caller

Ampliconreconstructorom ⭐ 14

Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data

Chromeqc ⭐ 13

ChromeQC: Summarize sequencing library quality of 10x Genomics Chromium linked reads

Angelfish Genome Assembly ⭐ 12

This is a pipeline describing how I assembled the complete genome of the freshwater angelfish, Pterophylllum scalare.

Redotable ⭐ 10

A dotplot application for DNA/RNA sequence

Automated Tool for Global Screening Array analysis

Genome Sequencing ⭐ 7

Assembled Phi-X174 genome using Overlap Graph, Kmer Composition and De-Bruijn Graph.

Extensible full DAG streaming computation server with services and jobs for RNA-Seq, Tn-Seq, WG-Seq and Term-Seq.

map and call next generation genomic sequencing

Clarity Ext ⭐ 6

Extensions for Clarity

Related Searches

Genomics Genome Sequencing (12)

Python Genome Sequencing (7)

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Sequence Alignment Genome Sequencing (4)

R Genome Sequencing (3)

Html Genome Sequencing (3)

Shell Genome Sequencing (3)

Illumina Genome Sequencing (3)

Dna Genome Sequencing (3)

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