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13 search results found

Metagem ⭐ 155

💎 An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

Carveme ⭐ 117

CarveMe: genome-scale metabolic model reconstruction

The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.

Semantic Image Manipulation using Scene Graphs (CVPR 2020)

Coding Genome Reconstruction using Iso-Seq data

Algorithm For Gene Order Reconstruction in Ancestors

An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al

Computational method for Comparative ReConstruction of genome-scale metabolic networks

The aim of this repository is to maintain, refine, and expand the AGORA collection of genome-scale metabolic reconstructions for human gut microbes through the use of issues. Please note that pull requests will be automatically closed.

Which_tree ⭐ 8

Testing of phylogenetic inference methods

Genotype-free genome reconstruction and ASE quantification

Ancestral gene order reconstruction with IG (intermediate genomes).

GAEseq: A Graph Auto-Encoder for Haplotype Assembly and Viral Quasispecies Reconstruction

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1-13 of 13 search results

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