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9 search results found

Pyrodigal ⭐ 111

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!

Ltr_finder ⭐ 35

LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.

Bacterial Annotation by Learned Representation of Genes

Dupgen_finder ⭐ 17

A pipeline used to identify different modes of duplicated gene pairs

Te_finder ⭐ 16

A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.

Multiphate ⭐ 14

Throughput PhATE processing of draft or finished phage genomes

alfie is the Anonymous Loci Finder!

Assembly_finder ⭐ 6

search NCBI assemblies

Metagenomic Sequence Simulator

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