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Search results for database kraken
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14 search results found
Bracken
⭐
228
Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.
Krakenuniq
⭐
201
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
Kraken_example_passport
⭐
57
An example that highlights using passportJs and securely storing user credentials.
Flextaxd
⭐
54
FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
Kraken2_classification
⭐
54
Snakemake workflow for metagenomic classification with Kraken2
Kraken_db_install_scripts
⭐
36
Updated Kraken DB install scripts to cope with new-ish NCBI structure
Metameta
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18
Gtdb_kraken
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10
Kraken(2) database based on the GTDB project
Mares_database_pipeline
⭐
9
Card Krakendb
⭐
8
Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database
Serum_readfilter
⭐
7
Kraken Trawl
⭐
7
A tool to help create custom `kraken` databases
Fastdeme
⭐
5
A fast, easy solution for metagenomic data analysis - Forked from Sander Vermeulens repository, developed during his internship
Babykraken
⭐
5
👶🦑 Very small Kraken2 database for bundling with pipelines
Sunbeam_databases
⭐
5
lock down databases for sunbeam pipeline use
Kodoja
⭐
5
Kodoja: identifying viruses from plant RNA sequencing data
Kraken Linked
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5
2019_classifiers_benchmark
⭐
5
Benchmarking of metagenomic classifiers
Download_crypto_currencies_data
⭐
5
Download and update data about crypto-currencies (bitcoin, ether, litecoin, etc.) from different exchanges (Binance, Bitmex, Bitfinex, GDAX, Kraken and Poloniex) with pyhton.
Kraken
⭐
5
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1-14 of 14 search results
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