Kraken_db_install_scripts
Updated Kraken DB install scripts to cope with new-ish NCBI structure
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Bracken | 228 | 6 months ago | 114 | gpl-3.0 | Python | |||||
| Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample. | ||||||||||
| Krakenuniq | 201 | 3 months ago | 107 | gpl-3.0 | C++ | |||||
| 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results | ||||||||||
| Kraken_example_passport | 57 | 10 years ago | 3 | JavaScript | ||||||
| An example that highlights using passportJs and securely storing user credentials. | ||||||||||
| Flextaxd | 54 | 5 months ago | 4 | September 30, 2019 | 5 | gpl-3.0 | Python | |||
| FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more ) | ||||||||||
| Kraken2_classification | 54 | a year ago | 2 | Python | ||||||
| Snakemake workflow for metagenomic classification with Kraken2 | ||||||||||
| Kraken_db_install_scripts | 36 | 7 years ago | 6 | mit | Perl | |||||
| Updated Kraken DB install scripts to cope with new-ish NCBI structure | ||||||||||
| Metameta | 18 | 5 years ago | 3 | other | Python | |||||
| Gtdb_kraken | 10 | 5 years ago | 2 | Perl | ||||||
| Kraken(2) database based on the GTDB project | ||||||||||
| Mares_database_pipeline | 9 | a year ago | Perl | |||||||
| Card Krakendb | 8 | 7 years ago | 1 | gpl-2.0 | R | |||||
| Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database | ||||||||||
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