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Search results for conda nextflow

9 search results found

Nextflow ⭐ 2,447

A DSL for data-driven computational pipelines

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Bactopia ⭐ 281

A flexible pipeline for complete analysis of bacterial genomes

Nanoclust ⭐ 59

NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads

Pipelines Nextflow ⭐ 41

A set of workflows written in Nextflow for Genome Annotation.

SPANDx - Comparative genomics for next-generation haploid sequence data

Bactpipe ⭐ 17

BACTpipe: An assembly and annotation pipeline for bacterial genomics

Tostadas ⭐ 10

🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission

Nxf Fastqc ⭐ 5

A simple fastp-MultiQC nextflow pipeline

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