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Search results for bioinformatics phylogenomics
bioinformatics
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phylogenomics
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20 search results found
Anvio
⭐
396
An analysis and visualization platform for 'omics data
Microbetrace
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53
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
Phykit
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44
a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies
Clipkit
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44
a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
Aniclustermap
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38
A tool for drawing ANI clustermap between all-vs-all microbial genomes
Phylofisher
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27
PhyloFisher is a software package written in Python3 that can be used for the creation, analysis, and visualization of phylogenomic datasets that consist of eukaryotic protein sequences.
Busco_phylogenomics
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26
BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins
Phylociraptor
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23
rapid phylogenomic tree calculator - A highly customizable framework for reproducible phylogenomic inference
Phantasm
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20
PHANTASM: PHylogenomic ANalyses for the TAxonomy and Systematics of Microbes
Orthosnap
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16
a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees
Tib Filoinfo
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14
Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México
Cafeplotter
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13
A tool for plotting CAFE5 gene family expansion/contraction result
Segul
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11
An ultrafast and memory efficient tool for phylogenomics
Coimbra Et Al 2021_currbiol
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9
Code used to analyse WGS data of giraffe in Coimbra et al. 2021 (https://doi.org/10.1016/j.cub.2021.04.033)
Captus
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8
Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
Kitsune
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8
a toolkit for evaluation of the lenght of k-mer in a given genome dataset for alignment-free phylogenimic analysis.
Fastdtlmapper
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7
Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method
Clann
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7
Clann: constructing consensus trees and supertrees from multiple source trees
Phylogenies.jl
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6
The BioJulia package for working with phylogenetic trees and geneologies.
Microbetrace
⭐
5
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
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1-20 of 20 search results
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